口腔菌群与银屑病关系的两样本双向孟德尔随机化研究

Oral microbiome and psoriasis: A two-sample bidirectional mendelian randomization study

  • 摘要:
    背景 研究发现肠道菌群与银屑病的发生密切相关,但口腔菌群与银屑病的关系尚不明确。
    目的 利用两样本孟德尔随机化(Mendelian randomization,MR)研究探讨口腔菌群与银屑病之间的关联。
    方法 在国家基因库生命大数据平台中获取暴露因素口腔菌群的单核苷酸多态性(single nucleotide polymorphism,SNP)数据,在公开的全基因组关联研究目录中获取结局变量银屑病的SNP数据;采用逆方差加权法、MR-Egger、加权中位数法、简单模型、加权模型5种回归模型进行MR分析;Cochran's Q检验、MR-PRESSO和MR-Egger截距等检验水平多效性和异质性。
    结果 口腔菌群中链球菌属.婴儿链球菌.1655(OR=1.347,P=0.005)、韦荣球菌属.1075(OR=1.243,P=0.009)与银屑病的发生呈正相关;保罗詹森菌属.1019(OR=0.767,P=0.039)、假丙酸杆菌属.291(OR=0.769,P=0.036)、石胡荽属.389(OR=0.797,P=0.006)、未知菌群.3196(OR=0.799,P=0.008)、链球菌属.假肺炎链球菌.G.1360(OR=0.833,P=0.034)与银屑病的发生呈负相关。
    结论 韦荣球菌属.1075增加银屑病发病风险,保罗詹森菌属.1019、假丙酸杆菌属.291和石胡荽属.389降低银屑病发病风险,但均与银屑病无反向因果效应。

     

    Abstract:
    Background Studies have found that there is relationship between intestinal flora and the occurrence of psoriasis, but the causal relationship between oral flora and psoriasis is not clear.
    Objective To explore the relationship between the oral microbiome and psoriasis using two-sample Mendelian randomization method.
    Methods Single nucleotide polymorphism (SNP) data for oral microbiome exposure and psoriasis outcomes were sourced from China National GeneBank DataBase and NHGRI-EBI GWAS Catalog. MR analysis was conducted using five regression models: MR-Egger, weighted median, inverse variance weighted (IVW), simple, and weighted models. Cochran's Q test, MR-PRESSO, and MR-Egger intercept were used to assess horizontal pleiotropy and heterogeneity.
    Results This study revealed that Streptococcus infantis.1655 (OR=1.347, P=0.005) and Veillonella.1075 (OR=1.243, P=0.009) were positively correlated with psoriasis. In contrast, Pauljensenia.1019 (OR=0.767, P=0.039), Pseudopropionibacterium.291 (OR=0.769, P=0.036), Centipeda.389 (OR=0.797, P=0.006), an unclassified microbiota.3196 (OR=0.799, P=0.008), and Streptococcus pseudopneumoniae.G.1360 (OR=0.833, P=0.034) were negatively correlated with psoriasis.
    Conclusion Veillonella.1075 increases the risk of psoriasis, while Pauljensenia.1019, Pseudopropionibacterium.291, and Centipeda.389 reduce the risk of psoriasis, however, they show no reverse causal relationship with psoriasis.

     

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