下咽鳞状细胞癌CD8⁺ T细胞耗竭相关基因FUT8 的单细胞鉴定及功能研究

Identification of exhaustion-associated gene FUT8 in CD8 ⁺ T cells of hypopharyngeal carcinoma by single-cell transcriptomics and functional validation

  • 摘要: 背景 下咽鳞状细胞癌(hypopharyngeal squamous cell carcinoma,HSCC)是头颈部鳞状细胞癌中预后最差的恶性肿瘤之一,其免疫抑制性肿瘤微环境(tumor microenvironment,TME)与CD8⁺ T细胞耗竭密切相关,但调控机制尚不明确。目的 基于单细胞RNA测序(single-cell RNA sequencing,scRNA-seq)鉴定HSCC的T细胞特异性亚群,筛选CD8⁺ T 细胞耗竭相关关键分子并验证其功能。方法 收集5 例HSCC患者癌组织及癌旁组织行单细胞RNA测序,经无监督聚类鉴定细胞亚群,对CD8⁺耗竭性T细胞(exhausted CD8⁺ T cells,CD8⁺ Tex)行差异表达分析筛选候选基因,结合TCGA数据库行生存及相关性分析。体外通过磁珠分选健康志愿者外周血CD8⁺ T细胞,经CD3/CD28 持续刺激建立耗竭模型,慢病毒介导FUT8沉默后,采用流式细胞术、qRT-PCR及CCK-8 检测耗竭表型与增殖变化,并建立与HSCC细胞系FaDu共培养体系评估杀伤效应。结果 共鉴定出9 类主要细胞群及多个T 细胞亚群,CD8⁺ Tex 在肿瘤组织中显著富集并高表达PDCD1、LAG3、TOX。差异分析发现FUT8 在肿瘤来源的CD8⁺ Tex 中显著上调,其高表达与患者总体生存期缩短显著相关(P=0.005),且与多种耗竭标志分子呈正相关。体外实验证实FUT8 沉默可降低PD-1 和LAG-3 表达,上调IFN-γ、TNF-α 及IL-2 水平,部分改善耗竭细胞增殖状态;共培养中FUT8 沉默的CD8⁺ Tex 对FaDu 细胞杀伤作用显著增强。结论 FUT8 是HSCC CD8 Tex⁺中上调的候选基因,可能参与CD8⁺ T细胞耗竭表型维持,并与抗肿瘤免疫功能改变相关,有望成为HSCC免疫治疗的新型靶点。

     

    Abstract: Background Hypopharyngeal squamous cell carcinoma (HSCC) is one of the most aggressive malignancies among head and neck squamous cell carcinomas with the poorest prognosis. Its immunosuppressive tumor microenvironment is closely associated with CD8 ⁺ T cell exhaustion; however, the underlying regulatory mechanisms remain poorly understood. Objective To identify T cell-specific subpopulations in HSCC through single-cell RNA sequencing (scRNA-seq), screen for key molecules associated with CD8⁺ T cell exhaustion, and validate their functional roles.Methods Tumor tissues and paired adjacent normal tissues were collected from five patients with HSCC for scRNA-seq. Cell subpopulations were identified by unsupervised clustering, and differential expression analysis was performed on exhausted CD8⁺ T cells to screen candidate genes. Survival and correlation analyses were conducted using the TCGA database. In vitro, CD8⁺ T cells were isolated from the peripheral blood of healthy volunteers by magnetic bead sorting, and a T cell exhaustion model was established through sustained CD3/CD28 stimulation. Following lentivirus-mediated FUT8 silencing, exhaustion phenotype and proliferative changes were assessed by flow cytometry, qRT-PCR, and CCK-8 assays. A co-culture system with the HSCC cell line FaDu was established to evaluate cytotoxic effects.Results A total of nine major cell clusters and multiple T cell subpopulations were identified. Exhausted CD8⁺ T cells were significantly enriched in tumor tissues and highly expressed PDCD1, LAG3, and TOX. Differential expression analysis revealed that FUT8 was significantly upregulated in tumor-derived exhausted CD8⁺ T cells. High FUT8 expression was significantly associated with reduced overall survival (P = 0.005) and positively correlated with multiple exhaustion markers. In vitro experiments confirmed that FUT8 silencing reduced PD-1 and LAG-3 expression, upregulated IFN-γ, TNF-α, and IL-2 levels, and partially improved the proliferative status of exhausted cells. In co-culture assays, FUT8-silenced exhausted CD8⁺ T cells exhibited significantly enhanced cytotoxicity against FaDu cells.Conclusion FUT8 is a specifically upregulated gene in exhausted CD8⁺ T cells in hypopharyngeal carcinoma. It may be associated with the maintenance of the exhausted CD8⁺ T-cell phenotype and antitumor immune alterations, and may represent a potential candidate target for HSCC immunotherapy.

     

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