Abstract: Based on the practice in SARS emergency research management of Chinese PLA General hospital，the status，objectives ，guideline and functions of the emergency research management in hospital were rethought；the time to start the emergency research plan，the categorization of projects，the principles of selecting priority research projects were discussed；and the key influence factors for getting an ideal achievement and effect on the management were also analyzed.All the above would be help with constructing a more effective emergency research management mechanism in hospital.